OSD-346 · GLDS-346
RNAseq analysis of the response of Arabidopsis thaliana phytochrome mutants (PhyA, PhyB) to fractional gravity under blue-light stimulation during spaceflight
Study overview
What the record says
Traveling to nearby extraterrestrial objects having a reduced gravity level (partial gravity) compared to Earth's gravity is becoming a realistic objective for space agencies. The use of plants as part of life support systems will require a better understanding of the interactions among plant growth responses including tropisms, under partial gravity conditions. Here, we present results from the Seedling Growth space experiments on the ISS, to complement the previously released GLDS-251 dataset including seeds of Arabidopsis thaliana wildtype plants. Seeds were germinated, and seedlings grew for six days under different gravity levels, namely micro-g, several intermediate partial-g levels, and 1g, and were subjected to irradiation with blue light for the last 48 hours. RNA was extracted was obtained for 20 wildtype samples for subsequent RNAseq analysis in GLDS-251, here we add 36 samples from similarly exposed PhyA and PhyB mutants.
Structured metadata
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01
Biological subject
- Organism
- Arabidopsis thaliana
02
Measurement
- Assay
- RNA Sequencing (RNA-Seq)
- Measures
- transcription profiling
- Platform
- Illumina
03
Experimental factors
- Factor type
- Genotype Space Flight Gravity Altered treatment
- Factor name
- Genotype, Spaceflight, Altered Gravity, Treatment
04
Mission context
- Mission
- SpaceX-2
- Flight program
- International Space Station (ISS)
- Space program
- NASA, ESA
People & publication
Follow the work
- Publication
- RNAseq analysis of the response of Arabidopsis thaliana to fractional gravity under blue-light stimulation during spaceflight RNA-seq analyses of Arabidopsis thaliana seedlings after exposure to blue-light phototropic stimuli in microgravity Changes in operational procedures to improve spaceflight experiments in plant biology in the European Modular Cultivation System A novel blue-light phototropic response is revealed in roots of Arabidopsis thaliana in microgravity
- Investigators
- Raul Joshua John Javier San-Huei Amanda Marie Yi-Chun Valery Sylvain Samrawit P Z M T V G Herranz Vandenbrink Kiss Medina Lai Polo Saravia-Butler Dinh Chen Boyko Costes Gebre